STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nubp1Nucleotide binding protein 1. (327 aa)    
Predicted Functional Partners:
ndor1
NADPH dependent diflavin oxidoreductase 1.
    
 0.900
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 0.895
LOC114450993
bolA-like protein 2.
     
 0.882
bola1
bolA family member 1.
     
 0.882
ciao3
Cytosolic iron-sulfur assembly component 3.
   
 0.874
narf
Nuclear prelamin A recognition factor.
   
 0.874
ENSPRNP00000046337
Glutaredoxin 3.
    
 0.867
carnmt1
Carnosine N-methyltransferase 1.
     
 0.865
aldh4a1
Aldehyde dehydrogenase 4 family member A1.
    
 0.847
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
    
 0.847
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.