STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008615Phospholipase C, delta 4a. (489 aa)    
Predicted Functional Partners:
LOC114445865
Diacylglycerol kinase zeta-like.
   
 0.880
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
   
 0.871
pip4k2c
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
   
 0.871
pip4k2a
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
   
 0.871
LOC114436242
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like.
   
 0.871
pip5k1c
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
   
 0.868
ipmk
Inositol polyphosphate multikinase.
    
 0.868
LOC114443257
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.
   
 0.868
LOC114440710
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.
   
 0.868
pip5kl1
Phosphatidylinositol-4-phosphate 5-kinase like 1.
    
 0.868
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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