STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbb3Amyloid beta precursor protein binding family B member 3. (503 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.909
LOC114453804
Amyloid-beta A4 protein-like.
    
 0.909
aplp2
Amyloid beta precursor like protein 2.
    
 0.847
aplp1
Amyloid beta precursor like protein 1.
    
 0.840
mre11
MRE11 homolog, double strand break repair nuclease.
   
  0.712
nbn
Nibrin.
    
  0.669
mars1
methionyl-tRNA synthetase 1.
   
 0.665
rad50
RAD50 double strand break repair protein.
   
 0.664
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 0.652
rps3
Ribosomal protein S3.
   
 0.645
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]