STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440446Phosphoribosyl pyrophosphate synthase-associated protein 2. (370 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.933
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.920
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 0.920
LOC114432353
Ribose-phosphate pyrophosphokinase 2.
  
0.910
LOC114442876
Ribose-phosphate pyrophosphokinase 1.
  
0.910
umps
Uridine monophosphate synthetase.
  
 
 0.869
rpia
Ribose 5-phosphate isomerase A.
  
 
 0.865
rbks
Ribokinase.
   
 0.860
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.835
ENSPRNP00000019594
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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