STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpnCentromere protein N. (344 aa)    
Predicted Functional Partners:
cenpm
Centromere protein M.
   
 0.995
cenpi
Centromere protein I.
   
 0.994
cenpw
Centromere protein W.
   
 0.992
cenpq
Centromere protein Q.
   
 0.992
cenpk
Centromere protein K.
   
 0.991
cenpp
Centromere protein P.
   
 0.987
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 
 0.935
LOC114443852
Caspase-3-like.
   
 0.934
ENSPRNP00000007949
annotation not available
   
 0.934
LOC114436906
Caspase-3-like.
   
 0.934
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.