STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008658CASK interacting protein 1. (1028 aa)    
Predicted Functional Partners:
LOC114447795
Peripheral plasma membrane protein CASK-like.
   
 0.782
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.782
ENSPRNP00000008655
annotation not available
 
      0.779
ENSPRNP00000014721
annotation not available
 
      0.774
ENSPRNP00000013516
annotation not available
 
  
   0.765
traf7
TNF receptor associated factor 7.
    
 0.705
mars1
methionyl-tRNA synthetase 1.
   
 0.665
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.660
birc6
Baculoviral IAP repeat containing 6.
   
 0.643
mpp1
Membrane palmitoylated protein 1.
    
 0.617
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.