STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shcbp1SHC binding and spindle associated 1. (686 aa)    
Predicted Functional Partners:
LOC114451906
Kinesin-like protein KIF23.
   
 0.980
KIF23
Kinesin family member 23.
   
 0.980
LOC114436083
Rac GTPase-activating protein 1-like.
   
 0.969
racgap1
Rac GTPase activating protein 1.
   
 0.969
ncapg
non-SMC condensin I complex subunit G.
   
  
 0.861
ncapg2
non-SMC condensin II complex subunit G2.
   
  
 0.861
LOC114453576
Kinesin-like protein KIF20A.
   
 0.859
kif20b
Kinesin family member 20B.
   
 0.859
ENSPRNP00000032716
annotation not available
   
 0.859
kif20a
Kinesin family member 20A.
   
 0.859
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.