STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008765Interferon regulatory factor 8. (413 aa)    
Predicted Functional Partners:
traf6
TNF receptor associated factor 6.
   
 0.749
suox
Sulfite oxidase.
     
 0.732
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.676
LOC114452268
C-C motif chemokine 4-like.
   
 
  0.671
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.667
spi1
Spi-1 proto-oncogene.
   
 
 0.666
LOC114441944
Transmembrane emp24 domain-containing protein 7-like.
   
 0.661
LOC114450351
TIR domain-containing adapter molecule 1-like.
   
 0.661
LOC114437792
Histone acetyltransferase p300-like.
    
 0.642
LOC114431572
Histone-binding protein RBBP4-like.
   
  0.634
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.