STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo2Roundabout guidance receptor 2. (1506 aa)    
Predicted Functional Partners:
LOC114442361
Slit homolog 3 protein-like.
   
 0.873
slit2
Slit guidance ligand 2.
   
 0.865
LOC114440560
Slit homolog 1 protein-like.
   
 0.865
slit1
Slit guidance ligand 1.
   
 0.865
nyx
Nyctalopin.
   
 0.848
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.734
abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase.
   
 0.725
abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
   
 0.725
ENSPRNP00000033325
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.722
LOC114447475
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
  0.722
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.