STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443883Circadian locomoter output cycles protein kaput-like. (873 aa)    
Predicted Functional Partners:
LOC114437278
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.906
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
   
0.906
arntl
Aryl hydrocarbon receptor nuclear translocator like.
   
0.906
LOC114437922
Cryptochrome-1-like.
    
 0.894
LOC114450157
Period circadian protein homolog 2-like.
    
0.876
LOC114450765
Period circadian protein homolog 1-like.
    
0.876
LOC114436731
Period circadian protein homolog 3-like.
    
0.876
PER2
Period circadian protein homolog 2-like.
    
0.876
LOC114451531
Cryptochrome-2-like.
    
 0.851
LOC114452690
Deoxyribodipyrimidine photo-lyase-like.
    
 0.851
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.