STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP6Rho GTPase activating protein 6. (895 aa)    
Predicted Functional Partners:
aspm
Abnormal spindle microtubule assembly.
   
   0.811
ndc80
NDC80 kinetochore complex component.
   
    0.710
rhot2
Ras homolog family member T2.
    
 0.706
LOC114435353
Cell division control protein 42 homolog.
    
 0.667
CDC42
Cell division control protein 42 homolog.
    
 0.667
LOC114447950
Cell division control protein 42 homolog.
    
 0.661
LOC114450059
Cell division control protein 42 homolog.
    
 0.661
LOC114439217
Rho-related GTP-binding protein RhoA-C-like.
    
 0.660
LOC114437949
Transforming protein RhoA.
    
 0.660
LOC114445687
Rho-related GTP-binding protein RhoG-like.
    
 0.660
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.