STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabra6Gamma-aminobutyric acid type A receptor alpha6 subunit. (458 aa)    
Predicted Functional Partners:
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
  0.775
gabarap
GABA type A receptor-associated protein.
    
  0.775
LOC114451843
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
  0.775
GABRR1
Gamma-aminobutyric acid receptor subunit rho-1-like.
  
0.734
LOC114427023
Gamma-aminobutyric acid receptor subunit rho-2-like.
  
0.733
GABRB3
Gamma-aminobutyric acid receptor subunit beta-3-like.
  
0.732
gabrb3
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
0.732
LOC114445833
Gamma-aminobutyric acid receptor subunit beta-4.
  
0.732
gabrb2
Gamma-aminobutyric acid type A receptor beta2 subunit.
  
0.730
LOC114427168
Gamma-aminobutyric acid receptor subunit beta-1-like.
  
0.730
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.