STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesk1Testis associated actin remodelling kinase 1. (681 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.849
traf7
TNF receptor associated factor 7.
   
 0.838
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.710
ripk4
Receptor interacting serine/threonine kinase 4.
    
0.695
cfl2
Cofilin 2.
   
 0.693
cfl1
Cofilin 1.
   
 0.693
LOC114447161
Cofilin-2-like.
   
 0.688
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.684
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.684
tirap
TIR domain containing adaptor protein.
   
 0.679
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.