STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000009084annotation not available (1567 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.903
cstf3
Cleavage stimulation factor subunit 3.
  
 0.891
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.887
nxf1
Nuclear RNA export factor 1.
   
 0.887
fip1l1
Factor interacting with PAPOLA and CPSF1.
   
 0.875
sf3b1
Splicing factor 3b subunit 1.
   
 0.866
papolg
poly(A) polymerase gamma.
    
 0.863
sympk
Symplekin.
   
 0.861
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.856
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.853
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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