STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gba2Glucosylceramidase beta 2. (874 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.994
LOC114432947
Intersectin-2-like.
    
 0.985
ENSPRNP00000041654
annotation not available
    
 0.985
ap2m1
Adaptor related protein complex 2 subunit mu 1.
   
 0.923
ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.919
asah1
N-acylsphingosine amidohydrolase 1.
    
 0.918
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.918
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
   
 0.914
gusb
Glucuronidase beta.
    
 0.896
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.894
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.