STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tex261Testis expressed 261. (196 aa)    
Predicted Functional Partners:
LOC114437048
Endoplasmic reticulum-Golgi intermediate compartment protein 2-like.
    
 
 0.545
tpt1
Tumor protein, translationally-controlled 1.
      
 0.510
ENSPRNP00000018928
annotation not available
      
 0.429
ergic3
ERGIC and golgi 3.
    
 
 0.429
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
   
  
 0.411
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
   
  
 0.411
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.