STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000009434annotation not available (184 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.811
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.811
mst1r
Macrophage stimulating 1 receptor.
    
  0.811
actb
Actin beta.
    
  0.781
LOC114442016
Actin, cytoplasmic-like.
    
  0.781
LOC114442015
Actin, cytoskeletal 3.
    
  0.781
LOC114440977
Actin, cytoplasmic-like.
    
  0.781
LOC114448787
Actin, cytoplasmic 2.
    
  0.781
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.692
LOC114428960
Actin, alpha cardiac muscle 1-like.
    
  0.669
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.