STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114433585Casein kinase II subunit alpha'-like. (351 aa)    
Predicted Functional Partners:
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.951
nol6
Nucleolar protein 6.
    
 0.942
LOC114432613
Casein kinase II subunit beta.
   
 0.931
LOC114448619
Casein kinase II subunit beta-like.
   
 0.931
LOC114442188
Lysine-specific demethylase 2A-like.
    
 0.929
LOC114440905
Lysine-specific demethylase 2B-like.
    
 0.929
LOC114443547
Lysine-specific demethylase 2B-like.
    
 0.929
kdm2a
Lysine demethylase 2A.
    
 0.929
LOC114440027
F-box/LRR-repeat protein 19-like.
    
 0.929
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.920
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.