STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438124Sodium- and chloride-dependent GABA transporter 1-like. (594 aa)    
Predicted Functional Partners:
slc1a1
Solute carrier family 1 member 1.
    
 0.649
slc1a2
Solute carrier family 1 member 2.
  
 
 0.603
LOC114433233
Excitatory amino acid transporter 2-like.
  
 
 0.603
LOC114439444
Excitatory amino acid transporter 2-like.
  
 
 0.601
LOC114428104
Excitatory amino acid transporter 5-like.
    
 0.593
LOC114449367
Excitatory amino acid transporter 5-like.
    
 0.593
LOC114434256
Excitatory amino acid transporter 5-like.
    
 0.593
slc6a3
Solute carrier family 6 member 3.
  
  
 
0.582
slc6a2
Solute carrier family 6 member 2.
  
  
 
0.582
LOC114434330
Excitatory amino acid transporter 1-like.
    
 0.577
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.