STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serpinf1Serpin family F member 1. (402 aa)    
Predicted Functional Partners:
f2
Coagulation factor II, thrombin.
  
 0.914
lrp5
LDL receptor related protein 5.
    
 0.856
lrp6
LDL receptor related protein 6.
    
 0.856
LOC114449587
Vitamin K-dependent protein C-like.
  
  0.823
LOC114450739
Plasminogen activator inhibitor 1-like.
  
  
 
0.794
vtn
Vitronectin.
   
 0.747
LOC114446240
Vitronectin-like.
   
 0.747
serpinc1
Serpin family C member 1.
  
0.733
hgfac
HGF activator.
  
 0.697
ENSPRNP00000011676
Serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3.
  
 
0.693
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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