STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426152Integrin alpha-6-like. (1081 aa)    
Predicted Functional Partners:
LOC114453864
Integrin beta-2-like.
   
 0.943
itgb1
Integrin subunit beta 1.
   
 0.943
LOC114450169
Integrin beta-1-like.
   
 0.942
itgb4
Integrin subunit beta 4.
   
 0.938
itgb5
Integrin subunit beta 5.
   
 0.913
itgb6
Integrin subunit beta 6.
   
 0.912
ENSPRNP00000022529
Integrin, beta 8.
    
 0.911
LOC114449577
Laminin subunit gamma-2-like.
    
 0.909
ENSPRNP00000042998
Laminin, alpha 2.
    
 0.894
ENSPRNP00000031648
annotation not available
   
 0.887
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.