STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e3Solute carrier family 35 member E3. (313 aa)    
Predicted Functional Partners:
rassf5
Ras association domain family member 5.
     
 0.832
LOC114442757
F-box/WD repeat-containing protein 11.
   
 
  0.808
c19h15orf40
Chromosome 19 C15orf40 homolog.
   
    0.746
ENSPRNP00000008826
MDM2 proto-oncogene.
 
   
 0.712
cdkn2b
Cyclin dependent kinase inhibitor 2B.
    
  0.707
mdm4
MDM4 regulator of p53.
 
   
  0.695
nup107
Nucleoporin 107.
 
    
 0.689
pidd1
P53-induced death domain protein 1.
    
  0.542
slc35c1
Solute carrier family 35 member C1.
      
 0.538
slc35c2
Solute carrier family 35 member C2.
      
0.535
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.