STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intuInturned planar cell polarity protein. (952 aa)    
Predicted Functional Partners:
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.971
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 0.959
cdc27
Cell division cycle 27.
  
 0.951
nek2
NIMA related kinase 2.
   
 0.949
cdc16
Cell division cycle 16.
   
 0.948
LOC114442804
Securin-like.
   
 0.946
bub3
BUB3 mitotic checkpoint protein.
   
 0.946
anapc4
Anaphase promoting complex subunit 4.
   
 0.944
cdc23
Cell division cycle 23.
  
 0.943
anapc1
Anaphase promoting complex subunit 1.
    
 0.941
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.