STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marveld2MARVEL domain containing 2. (579 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.936
LOC114437105
Tight junction protein ZO-1-like.
   
 0.923
LOC114433785
Tight junction protein ZO-1-like.
   
 0.923
LOC114434314
Tight junction protein ZO-3-like.
   
 0.891
LOC114441371
Tight junction protein ZO-2-like.
   
 0.867
LOC114443256
Tight junction protein ZO-2-like.
   
 0.867
LOC114450445
MARVEL domain-containing protein 2-like.
  
  
 
0.845
cdk9
Cyclin dependent kinase 9.
    
 0.807
eaf2
ELL associated factor 2.
    
 0.785
eaf1
ELL associated factor 1.
    
 0.785
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.