STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000009746annotation not available (264 aa)    
Predicted Functional Partners:
cpeb1
Cytoplasmic polyadenylation element binding protein 1.
      
 0.469
cdt1
Chromatin licensing and DNA replication factor 1.
      
 0.469
c19h15orf40
Chromosome 19 C15orf40 homolog.
      
 0.457
nudt5
Nudix hydrolase 5.
      
 0.443
SERTAD2
SERTA domain containing 2.
      
 0.420
ECHDC3
enoyl-CoA hydratase domain containing 3.
      
 0.418
cdc123
Cell division cycle 123.
      
 0.408
ccdc3
Coiled-coil domain containing 3.
      
 0.407
dhtkd1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.405
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.