STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000009787annotation not available (118 aa)    
Predicted Functional Partners:
dnai1
Dynein axonemal intermediate chain 1.
   
 
 0.988
ENSPRNP00000047908
annotation not available
     
 0.965
ccdc103
Coiled-coil domain containing 103.
   
 
 0.960
dnai2
Dynein axonemal intermediate chain 2.
   
 
 0.958
WDR63
WD repeat domain 63.
   
 
 0.942
ENSPRNP00000004910
annotation not available
   
 
 0.941
wdr78
WD repeat domain 78.
   
 
 0.934
atp9b
ATPase phospholipid transporting 9B (putative).
   
 
 0.843
ATP9A
ATPase phospholipid transporting 9A (putative).
   
 
 0.843
ENSPRNP00000041929
annotation not available
   
   0.835
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.