STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snapinSNAP associated protein. (128 aa)    
Predicted Functional Partners:
bloc1s2
Biogenesis of lysosomal organelles complex 1 subunit 2.
   
 0.995
bloc1s1
Biogenesis of lysosomal organelles complex 1 subunit 1.
   
 0.993
LOC114448970
dysbindin-A-like.
   
 0.989
dtnbp1
Dystrobrevin binding protein 1.
   
 0.989
bloc1s6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.981
borcs7
BLOC-1 related complex subunit 7.
   
 0.979
snap25
Synaptosome associated protein 25.
    
 0.978
borcs5
BLOC-1 related complex subunit 5.
   
 0.978
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.977
gak
Cyclin G associated kinase.
   
 
  0.977
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.