STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441772Rap guanine nucleotide exchange factor 1-like. (607 aa)    
Predicted Functional Partners:
crkl
CRK like proto-oncogene, adaptor protein.
    
 0.960
CRK
Adapter molecule crk-like.
    
 0.960
LOC114445546
Adapter molecule crk-like.
    
 0.960
grb2
Growth factor receptor bound protein 2.
   
 0.904
cblb
Cbl proto-oncogene B.
    
 0.898
rhoq
Ras homolog family member Q.
    
 0.844
ENSPRNP00000031141
Ras homolog family member H.
    
 0.844
cdh1
Cadherin 1.
     
 0.842
LOC114437952
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.833
ENSPRNP00000020901
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.833
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.