STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chek2Checkpoint kinase 2. (519 aa)    
Predicted Functional Partners:
atr
ATR serine/threonine kinase.
    
 0.995
tp53bp1
Tumor protein p53 binding protein 1.
    
 0.994
chek1
Checkpoint kinase 1.
   
0.994
cdc25b
Cell division cycle 25B.
   
 0.980
cdc7
Cell division cycle 7.
    
 
 0.971
brca1
BRCA1 DNA repair associated.
   
 0.966
PLK1
Polo like kinase 1.
   
0.959
plk3
Polo like kinase 3.
   
0.959
plk2
Polo like kinase 2.
   
0.959
piezo1
Piezo type mechanosensitive ion channel component 1.
    
 0.958
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.