STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114445384Ubiquitin-associated and SH3 domain-containing protein B-like. (645 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.908
miox
Myo-inositol oxygenase.
  
 
 0.818
gusb
Glucuronidase beta.
    
  0.800
pgk1
Phosphoglycerate kinase 1.
    
 0.757
psat1
Phosphoserine aminotransferase 1.
    
 0.757
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
     
 0.752
uap1l1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
     
 0.752
cstf3
Cleavage stimulation factor subunit 3.
    
 0.750
LOC114451780
Glucose-6-phosphate isomerase-like.
    
 0.729
gpi
Glucose-6-phosphate isomerase.
    
 0.729
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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