STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440886Calcium/calmodulin-dependent protein kinase type II subunit beta. (604 aa)    
Predicted Functional Partners:
calm3
Calmodulin 3.
   
 0.906
calm1
Calmodulin 1.
   
 0.906
LOC114427091
Calmodulin.
   
 0.906
calml4
Calmodulin like 4.
    
 0.897
LOC114448533
Voltage-dependent calcium channel gamma-4 subunit-like.
   
 0.870
calm2
Calmodulin 2.
   
 0.867
CACNG2
Voltage-dependent calcium channel gamma-2 subunit.
    
  0.860
LOC114439791
Voltage-dependent calcium channel gamma-4 subunit-like.
    
  0.859
cacng7
Calcium voltage-gated channel auxiliary subunit gamma 7.
    
  0.859
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
    
  0.855
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.