STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erp27Endoplasmic reticulum protein 27. (258 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.906
hspa5
Heat shock protein family A (Hsp70) member 5.
  
 0.855
LOC114448986
Cytochrome b5 reductase 4.
  
 0.845
pdia3
Protein disulfide isomerase family A member 3.
   
 0.803
pdia4
Protein disulfide isomerase family A member 4.
   
 0.803
gak
Cyclin G associated kinase.
   
 0.798
LOC114428798
Mitochondrial peptide methionine sulfoxide reductase-like.
   
 0.787
LOC114427166
Mitochondrial peptide methionine sulfoxide reductase-like.
   
 0.787
hyou1
Hypoxia up-regulated 1.
  
 0.782
ero1a
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.773
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.