STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426304Glypican-6-like. (570 aa)    
Predicted Functional Partners:
LOC114450860
Syndecan-4-like.
    
 0.775
fzd4
Frizzled class receptor 4.
    
 0.768
LOC114442311
Proheparin-binding EGF-like growth factor.
    
 0.728
LOC114449055
Syndecan-2-like.
    
 0.728
dhh
Desert hedgehog signaling molecule.
    
 0.677
shh
Sonic hedgehog signaling molecule.
    
 0.677
LOC114449849
Tiggy-winkle hedgehog protein-like.
    
 0.677
LOC114426709
Indian hedgehog B protein-like.
    
 0.677
LOC114442258
Putative fibroblast growth factor 1.
    
 0.672
fgf1
Fibroblast growth factor 1.
    
 0.672
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.