STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114435568Glutamate receptor ionotropic, NMDA 2B-like. (1624 aa)    
Predicted Functional Partners:
LOC114441094
Glutamate receptor ionotropic, NMDA 1-like.
   
0.909
LOC114443563
Glutamate receptor ionotropic, NMDA 1.
   
0.909
LOC114447795
Peripheral plasma membrane protein CASK-like.
   
 0.880
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.880
GRIN3A
Glutamate receptor ionotropic, NMDA 3A-like.
    
0.767
LOC114449578
Discs large homolog 1-like protein.
    
 0.718
dlg3
Discs large MAGUK scaffold protein 3.
    
 0.718
LOC114434164
Disks large homolog 1-like.
    
 0.718
LOC114431266
Disks large homolog 4-like.
    
 0.718
dlg4
Discs large MAGUK scaffold protein 4.
    
 0.718
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.