STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cotl1Coactosin like F-actin binding protein 1. (142 aa)    
Predicted Functional Partners:
LOC114433667
Arachidonate 12-lipoxygenase, 12R-type-like.
    
 
 0.834
immt
Inner membrane mitochondrial protein.
    
 0.752
cap1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 
 0.745
cap2
Cyclase associated actin cytoskeleton regulatory protein 2.
   
 
 0.745
gak
Cyclin G associated kinase.
   
 
 0.739
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 0.716
hip1r
Huntingtin interacting protein 1 related.
    
 
 0.677
LOC114436137
Bridging integrator 2-like.
   
 
 0.623
LOC114432037
Myc box-dependent-interacting protein 1-like.
   
 
 0.623
amph
Amphiphysin.
   
 
 0.623
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.