STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000010080annotation not available (267 aa)    
Predicted Functional Partners:
LOC114439139
Tubulin alpha-8 chain-like.
    
  0.853
parp1
poly(ADP-ribose) polymerase 1.
   
  0.846
LOC114426288
Caspase-8-like.
    
 0.839
parp2
poly(ADP-ribose) polymerase 2.
   
  0.837
lmnb1
Lamin B1.
    
  0.836
ENSPRNP00000020552
annotation not available
    
 0.835
lmnb2
Lamin B2.
    
  0.834
dffa
DNA fragmentation factor subunit alpha.
    
  0.830
parp3
poly(ADP-ribose) polymerase family member 3.
   
  0.829
ENSPRNP00000020556
annotation not available
    
  0.829
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.