STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapre1Microtubule associated protein RP/EB family member 1. (257 aa)    
Predicted Functional Partners:
dctn1
Dynactin subunit 1.
    
 
 0.942
LOC114450838
Dynactin subunit 1-like.
    
 
 0.942
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.915
bub3
BUB3 mitotic checkpoint protein.
   
 0.867
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 0.866
aurka
Aurora kinase A.
   
 0.856
LOC114442548
Aurora kinase B-like.
   
 0.856
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.836
ENSPRNP00000004909
annotation not available
   
 
 0.782
ENSPRNP00000026691
annotation not available
   
 
 0.782
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.