STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114452539Voltage-dependent T-type calcium channel subunit alpha-1H-like. (1797 aa)    
Predicted Functional Partners:
cacna1a
Calcium voltage-gated channel subunit alpha1 A.
   
0.899
cacng4
Calcium voltage-gated channel auxiliary subunit gamma 4.
     
 0.859
LOC114439791
Voltage-dependent calcium channel gamma-4 subunit-like.
   
 
 0.857
cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
     
 0.855
LOC114443905
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
  
0.850
LOC114439792
Voltage-dependent calcium channel gamma-1 subunit-like.
     
 0.849
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
     
 0.849
LOC114436325
Voltage-dependent calcium channel gamma-2 subunit-like.
     
 0.848
CACNG2
Voltage-dependent calcium channel gamma-2 subunit.
   
 
 0.845
cacna1e
Calcium voltage-gated channel subunit alpha1 E.
   
0.840
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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