STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudcNuclear distribution C, dynein complex regulator. (340 aa)    
Predicted Functional Partners:
LOC114453748
ranBP2-like and GRIP domain-containing protein 3.
   
 0.979
LOC114446397
Lissencephaly-1 homolog B.
   
 0.939
PAFAH1B1
Lissencephaly-1 homolog.
   
 0.939
SGO1
Shugoshin 1.
    
 0.868
incenp
Inner centromere protein.
     
 0.851
cct7
Chaperonin containing TCP1 subunit 7.
   
 
 0.817
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
     
 0.813
rcc2
Regulator of chromosome condensation 2.
   
  0.806
KIF18A
Kinesin family member 18A.
     
 0.790
zhx2
Zinc fingers and homeoboxes 2.
   
 0.790
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.