STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garnl3GTPase activating Rap/RanGAP domain like 3. (1046 aa)    
Predicted Functional Partners:
afdn
Afadin, adherens junction formation factor.
    
 0.636
ralb
RAS like proto-oncogene B.
    
 0.565
carnmt1
Carnosine N-methyltransferase 1.
      
 0.531
trappc10
Trafficking protein particle complex 10.
      
 0.531
tbrg1
Transforming growth factor beta regulator 1.
   
  
 0.525
ralgps1
Ral GEF with PH domain and SH3 binding motif 1.
   
  
 0.514
rapgefl1
Rap guanine nucleotide exchange factor like 1.
   
  0.494
gramd1b
GRAM domain containing 1B.
      
 0.491
ei24
EI24 autophagy associated transmembrane protein.
      
 0.485
rala
RAS like proto-oncogene A.
    
 0.481
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.