STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432449Nuclear receptor subfamily 0 group B member 2-like. (262 aa)    
Predicted Functional Partners:
LOC114441246
Steroidogenic factor 1-like.
   
0.887
nr5a2
Nuclear receptor subfamily 5 group A member 2.
   
0.887
LOC114440545
Nuclear receptor subfamily 5 group A member 2-like.
   
0.872
PPARA
Peroxisome proliferator-activated receptor alpha-like.
   
 0.767
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.767
ncor2
Nuclear receptor corepressor 2.
    
 0.741
ncor1
Nuclear receptor corepressor 1.
    
 0.741
med1
Mediator complex subunit 1.
    
 0.740
hnf4a
Hepatocyte nuclear factor 4 alpha.
   
0.732
LOC114453477
Hepatocyte nuclear factor 4-gamma-like.
   
0.732
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.