STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114447107Phosphatase and actin regulator 4A-like. (1064 aa)    
Predicted Functional Partners:
LOC114451580
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 
 0.609
LOC114440612
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 
 0.609
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
    
 
 0.609
LOC114448986
Cytochrome b5 reductase 4.
     
 0.447
tbl2
Transducin beta like 2.
      
 0.422
kif3a
Kinesin family member 3A.
      
 0.408
slitrk6
SLIT and NTRK like family member 6.
      
 0.406
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.