STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnttip1Deoxynucleotidyltransferase terminal interacting protein 1. (291 aa)    
Predicted Functional Partners:
elmsan1
ELM2 and Myb/SANT domain containing 1.
    
 
 0.943
LOC114428925
ELM2 and SANT domain-containing protein 1-like.
    
 
 0.943
snupn
Snurportin 1.
     
 0.909
LOC114451148
Uncharacterized LOC114451148.
    
 
 0.860
ENSPRNP00000010246
Histone deacetylase 8.
    
 
 0.738
LOC114428135
Probable histone deacetylase 1-B.
    
 
 0.738
HDAC1
Probable histone deacetylase 1-B.
    
 
 0.738
mier1
MIER1 transcriptional regulator.
    
 
 0.738
mier3
MIER family member 3.
    
 
 0.738
HDAC2
Histone deacetylase 2.
    
 
 0.738
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.