STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc123Cell division cycle 123. (356 aa)    
Predicted Functional Partners:
LOC114452858
Eukaryotic translation initiation factor 2 subunit 3.
    
 
 0.936
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
    
 
 0.936
eif2s2
Eukaryotic translation initiation factor 2 subunit beta.
    
 
 0.914
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA specific.
    
 
 0.885
cops5
COP9 signalosome subunit 5.
   
    0.780
c19h11orf58
Chromosome 19 C11orf58 homolog.
   
    0.773
nudt5
Nudix hydrolase 5.
   
  
 0.682
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 
 0.590
rnf8
Ring finger protein 8.
   
 
 0.576
wdfy2
WD repeat and FYVE domain containing 2.
   
  
 0.538
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.