STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
st3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 5. (402 aa)    
Predicted Functional Partners:
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1.
     
0.919
b4galt6
Beta-1,4-galactosyltransferase 6.
     
 0.869
LOC114439026
Beta-1,4 N-acetylgalactosaminyltransferase 1-like.
    
 0.867
b4galt5
Beta-1,4-galactosyltransferase 5.
     
 0.867
b4galnt1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
    
 0.867
hexa
Hexosaminidase subunit alpha.
     
 0.850
hexb
Hexosaminidase subunit beta.
     
 0.850
LOC114447543
Lactosylceramide alpha-2,3-sialyltransferase-like.
  
  
 
0.839
fam149b1
Family with sequence similarity 149 member B1.
     
 0.815
galnt7
Polypeptide N-acetylgalactosaminyltransferase 7.
     
 0.681
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.