STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt5Nudix hydrolase 5. (218 aa)    
Predicted Functional Partners:
nudt12
Nudix hydrolase 12.
   
 0.940
nudt13
Nudix hydrolase 13.
    
 0.922
ENSPRNP00000019594
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.907
nudt9
Nudix hydrolase 9.
    
 0.906
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.883
gmppa
GDP-mannose pyrophosphorylase A.
  
 0.878
dcp1b
Decapping mRNA 1B.
    
 0.877
dcp1a
Decapping mRNA 1A.
    
 0.877
edc4
Enhancer of mRNA decapping 4.
    
 0.862
LOC114432353
Ribose-phosphate pyrophosphokinase 2.
  
 
 0.853
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.