STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pros1Protein S. (679 aa)    
Predicted Functional Partners:
LOC114442840
Coagulation factor VIII-like.
   
 0.888
f5
Coagulation factor V.
   
 0.888
edil3
EGF like repeats and discoidin domains 3.
   
 0.865
ggcx
Gamma-glutamyl carboxylase.
   
 
 0.851
AXL
AXL receptor tyrosine kinase.
     
 0.814
LOC114447836
Tyrosine-protein kinase Mer-like.
     
 0.814
hephl1
Hephaestin like 1.
   
 0.787
LOC114435092
Ceruloplasmin-like.
   
 0.787
LOC114449587
Vitamin K-dependent protein C-like.
    
0.770
LOC114427881
Tyrosine-protein kinase receptor TYRO3-like.
     
 0.717
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.