STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbh1F-box DNA helicase 1. (1087 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
    
 0.998
blm
BLM RecQ like helicase.
  
 0.996
recql5
RecQ like helicase 5.
  
 0.993
pcna
Proliferating cell nuclear antigen.
  
 0.973
rbx1
Ring-box 1.
    
 0.969
rad51
RAD51 recombinase.
  
 
 0.964
ENSPRNP00000016345
annotation not available
  
 
 0.963
rad51d
RAD51 paralog D.
  
 
 0.962
rad18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.940
rad52
RAD52 homolog, DNA repair protein.
    
 
 0.938
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.