STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxmp4Peroxisomal membrane protein 4. (214 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
    
 0.861
pex11b
Peroxisomal biogenesis factor 11 beta.
     
 0.791
LOC114452700
Peroxisomal membrane protein 11A-like.
     
 0.791
pxmp2
Peroxisomal membrane protein 2.
     
 0.773
pex12
Peroxisomal biogenesis factor 12.
   
 
 0.766
pex13
Peroxisomal biogenesis factor 13.
     
 0.760
abcd1
ATP binding cassette subfamily D member 1.
   
 
 0.760
pex11g
Peroxisomal biogenesis factor 11 gamma.
     
 0.758
pex16
Peroxisomal biogenesis factor 16.
     
 0.727
LOC114439390
Peroxisomal membrane protein PMP34-like.
     
 0.713
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.