STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCML2Scm polycomb group protein like 2. (695 aa)    
Predicted Functional Partners:
pcgf2
Polycomb group ring finger 2.
    
 0.900
bmi1
BMI1 proto-oncogene, polycomb ring finger.
    
 0.900
RING1
Ring finger protein 1.
    
 0.887
rnf2
Ring finger protein 2.
    
 0.887
PCGF3
Polycomb group ring finger 3.
    
 0.860
pcgf5
Polycomb group ring finger 5.
    
 0.860
cbx8
Chromobox 8.
    
 0.856
LOC114439616
Chromobox protein homolog 8-like.
    
 0.856
cbx6
Chromobox 6.
    
 0.839
LOC114442188
Lysine-specific demethylase 2A-like.
    
 0.824
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.